PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0277s0039.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 379aa    MW: 42274.4 Da    PI: 5.8618
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0277s0039.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.91.1e-19139197259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +D ++W+K Gq   k+s+f rsY++C+++ +C ++k v++++e p+ +++tY+g H h+
  Kalax.0277s0039.1.p 139 EDVWAWKKNGQNFTKDSPFLRSYFKCSTSeECFARKAVQQTSEVPEKFIVTYTGLHIHP 197
                          8*************************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-20128199IPR003657WRKY domain
PROSITE profilePS5081121.93133199IPR003657WRKY domain
SuperFamilySSF1182909.42E-18136199IPR003657WRKY domain
SMARTSM007747.0E-18138198IPR003657WRKY domain
PfamPF031064.7E-17139197IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MDNFKYDVHA QIGSSSSSNF SPGESCPFSV SDPTSFFLNV KTEIPFSYPE LDSIFDPQDA  60
ADQFDVFAPP IMKPCTTPSS DITTTTATTA VAAPSPLPKV EKSKARSPSF EEIYKQKLKK  120
KSSKKISSVH EVGDGKQIED VWAWKKNGQN FTKDSPFLRS YFKCSTSEEC FARKAVQQTS  180
EVPEKFIVTY TGLHIHPPPN TENPIRGCYK PLRAKRSMEG GGSSNNASSS SSTMTNQTNN  240
NFALTPVSSD YHFSEMMMYS SEGEVTEETR DDEVEELGED LFLHDDVTGD ASLDLSCRDY  300
VGISKCECRE KRDDSGAKIH QNCLCLYPHL TRSSLYFIVI RTGPDRSDIY ILSRCITNRI  360
DRFLMKSMNR TGHMIGLL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.12e-18WRKY family protein